Current projects

Title Project period Project funding

Previous projects

Title Project period Project funding
Three-dimensional Human Genome structure at the population scale: computational algorithm and experimental validation for lymphoblastoid cell lines of selected families from 1000 Genomes 2017 - 2020 TEAM, FNP
iCell: information processing in living organisms. The role of three-dimensional structure and multi-scale properties in controlling the biological processes in a cell. 2015 - 2019 OPUS, NCN
Virtual High Throughput Screening (vHTS) derivation of a cross-immunity model for the Influenza-A Virus Infections 2014 - 2017 OPUS, NCN
Analysis of mechanisms of drug resistance to trastuzumab in HER2 overexpressing breast cancer based on gene expression changes in selected cell lines 2016 - 2019 PRELUDIUM, NCN
Contacts of structural chromatin domains investigated by GAM method. A scientific internship at the laboratory of Professor Ana Pombo in Berlin. 2019 - 2019 MINIATURA, NCN
Identification of structural variants in human genome using long-read Next Generation Sequencing with the Oxford Nanopore technology 2018 - 2019 MINIATURA, NCN
Co-financing of the internship at the 4D Nucleome Center at the Jackson Laboratory for Genomic Medicine 2019 - 2019 MINIATURA, NCN
Genome-wide chromatin interactions in the mouse brain in vivo – establishment and validation of Hi-C protocol 2018 - 2019 DSM, Polish Ministry of Science and Higher Education
Modeling and analysis of the spatial structure and dynamics of chromatin in the cell nucleus 2016 - 2017 ETIUDA, NCN
Methods of integrating multi-scale biological information in artificial learning systems 2015 - 2016 ETIUDA, NCN
Performing cohesin HiChIP experiments for mother–father–child trio from 1000 Genome Project 2018 - 2018 Boehringer Ingelheim Fonds, research visit